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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899572.1_cds_XP_016449556.1_44091
CDS Infomation

[gene=LOC107774521] [db_xref=GeneID:107774521] [protein=ABC transporter A family member 11-like] [protein_id=XP_016449556.1] [location=join(15384..15758,16663..16897,17006..17202,17281..17466,17569..17664,17741..17929,18162..18321,18416..18669,19122..19239,19337..19413,19510..19599,19801..19944,20027..20329,20410..20490,20588..20764,21130..21327)] [gbkey=CDS]
Sequence

ATGGCAATGGAATTGCAAAGAGGATTTTCATTGTTTTGGCAGCAAACAATTGCTTTACTG
AAGAAGAATTTCTTGCTCTCAATGAGAAGTAAGAGAGCCACATTTCTTCAGTTATTTTCG
TCGCTCTTCTTCTTAGGTCTCTTGTTTGGAATCCAAAAGGCCATGGATTTTCGCTCCAAG
CATCCATCCGCTATAGGGGCAGTCAACGATCCTCAGGCTCTGATGAATCCTCCTATACCG
CCATGCGAGAACAAGTTCTTTATCAAGCGTCCGTGTTATGACTTTGTGTGGAGTGGAAGT
GGCAACAGAAGAATTGAATCCATTGTTACTGGAATTCTGACTAATAATCCAGGTCGACCT
ATTCCTCCTACCAAGGTCAAGTCATTTAGTACAAAAGATGATCTGAACAATTGGCTTCTC
AGTGATCCAATGCGTACCCCTGGAGCTTTGCATTTCGTGGAACGAAATGCCACAGTTATA
AGTTATGGTGTTGTAACAAATACATCTACATACATTCAAGTTCCAAGGGTATCTGAAGAT
CCAACTTTCAAATTCCAACTTCCCCTTCAACTAGCTGCATCTCGAGAGATTGCAAGGTCC
TTGCTTGGAGATTCAAAGTTCAGCTGGAATGTTGGTCTCAAGGAATTTGCGCATCCTGCA
ATAGAAGACCGTGAAGCTGGAGATTCATTTCAAAACTTTGCTTTTGTTGCTATTTTCAGT
CCAATCTTCTTCTATGCAATCTCTATGTTTGGTTTTGTATTTCAGATCAGCTCAATGGTT
CTTGAGAAGGAGCTCAAACTTCGCCAGGCAATGACTGTGATGGGACTTTTTGATTCTGCT
TATTGGTGCTCGTGGCTTATATGGGAGGGAATTATGACATTCCTTTCATCCCTCCTCATT
GTTCTTTTTGGAATGATGTTTCAGCTTCACCTTTTCTTGAAAAACAACTTTTTGATTGTT
CTACTTTTGTTCTTTCTTTTCCAACTCAACATGGTTGGTTTTGCTTTCTTAGTATCAAAC
TTCATCCGCAAGTCCGCTTCAACTACATCTGCCAGCTTTGCCATATTTGTAATTGGTTGT
GGAACTCAGACATTTTCAGGGGTTCTCTACAGTGACACAAGCCATAAAACAAGCTATAGA
AGAACAATTTGGTCCTTCTTTCCGCCTAATCCCTTTTCAGGAGGTCTGAATCTGTTATTA
TATGCAGCAGACAATGGCGGGATCAGCTGGAGTAGGCTTTCCGAGTGTGACATTGATGAT
TCGTATTGCTATTCAATTCTCCATTACTATCGATGGCTCATTGCGACGTTCTTCCTGTGG
CTTATTTTGGCTATCTACCTTGACAATATCATACCCAACTCAGCAGGTGTAAGAAAACCC
TTATATTACTTTTTGAAACCTGGATATTGGAGAGGAAGAGGTGAAGAAAAGTTTAAAGAA
AATGCTCCATGTTGCGGTTCTGGTTCTGCGCCGCCACTTGACAGTTTTACTCAAGATGAT
GAAGATGTTCTTGTTGAGGAAAATAGAGTGAAACAACAAGCGGAGGAAGGCAATGTTGAT
CCTAATGTTGCTGTGCAGCTACAAGATCTTAATAAGATGTATTCTAGGACAATAAGCTTA
AGTTGCCATTCTTGCTGCCTTCTCTGTTGCTACTGTAGATGCAAGATTAAGAAACCTTAT
AAGGCTGTCCAGGGTCTTTGGTTAAATCTTGAGAAGGATCAATTGTTCTGTCTCTTGGGA
CCAAATGGAGCTGGCAAAACAACTGTAATTAGTTGCTTGACTGGTATAACTCCAGTCACT
CATGGAAATGCACTGATCTATGGAAACTCTGTTCGAAGTTCGAATGGTATCTCCAACATA
AGAAAGCTGATTGGAGTCTGCTCGCAGTTTGACACACTTTGGGATGCATTATCCGGACAA
GAGCACCTTGAACTCTTTGCCACCATCAAAGGCTTATCACCAACTTCAAAAAGATCGGAA
ACTAAAAAATTGTTGGCTGATGTGAAACTTGATGATGTTGCCAAAGTAAGAGCAGGTGGC
TACAGTGGTGGAATGAAGCGTCGCCTCAGTTTAGCAATAGCATTGATTGGAGATCCAAAA
CTTCTATTTTTAGATGAACCAACAACTGGTATGGATCCTGTAACTCGAAGGCATATCTGG
AGTGTAATTGAGGCTGCAAAGCAAGGACGTTCTATTATTCTGACAACACATTCTATGGAG
GAAGCTAATATTTTATCAGATCGCATTGGGATTATGGCAAAGGGTAGACTTCGTTGCATT
GGAACATCAACCTTGCTGAAGTCTCGATTTGGAGTTGGCTTTATCGCTAAAGTTAGCTTC
AGTAAAACTGCTGACAATGTGAATTCCATGGCAAATACACTAGACAGCAAGCATCATGAG
GCTGTCAAAGAATTCTTCAAACAGCATTTAGATGTCACACCAAAAGAGGAAGATAAATCC
TTCTTGACTTTTGTTATCCCTCATGAAAAGGAGAAGCTACTAGAAAATTTCTTTGCAGAG
CTAGAAAATAGAGAACTGGAGTTTGGCATATTAAATATCCAAATTGGTATTACAACGCTA
GAAGAAGTGTTCTTGAACATTGCAAAGAAGGCAGAGCTTGAAGTGGCTGCATCCGAGGAA
ACTATCATGCCGCTGATTTTACCATCAGGAACTACTCTCCAAGTACCTCTAGGATCAAAG
TATGTGGAGATCCCTGGCACAATTTCCACAGAGAACCCCCGAGGCCTTATGATCGAGGTC
TATTGGGAGCAAGATGATCATGGAAATCTCTGCATTTCTGGCCATTCAGATGAGATTCCA
GTGCCACCTAATCTTCAAATATCAACTTCCACTTTAGTTATTGCCAAGCCGAAAGTCTAA

Peptide Sequence

PEP ID

XP_016449556.1
PEP Infomation

PREDICTED: ABC transporter A family member 11-like [Nicotiana tabacum]
Sequence

MAMELQRGFSLFWQQTIALLKKNFLLSMRSKRATFLQLFSSLFFLGLLFGIQKAMDFRSK
HPSAIGAVNDPQALMNPPIPPCENKFFIKRPCYDFVWSGSGNRRIESIVTGILTNNPGRP
IPPTKVKSFSTKDDLNNWLLSDPMRTPGALHFVERNATVISYGVVTNTSTYIQVPRVSED
PTFKFQLPLQLAASREIARSLLGDSKFSWNVGLKEFAHPAIEDREAGDSFQNFAFVAIFS
PIFFYAISMFGFVFQISSMVLEKELKLRQAMTVMGLFDSAYWCSWLIWEGIMTFLSSLLI
VLFGMMFQLHLFLKNNFLIVLLLFFLFQLNMVGFAFLVSNFIRKSASTTSASFAIFVIGC
GTQTFSGVLYSDTSHKTSYRRTIWSFFPPNPFSGGLNLLLYAADNGGISWSRLSECDIDD
SYCYSILHYYRWLIATFFLWLILAIYLDNIIPNSAGVRKPLYYFLKPGYWRGRGEEKFKE
NAPCCGSGSAPPLDSFTQDDEDVLVEENRVKQQAEEGNVDPNVAVQLQDLNKMYSRTISL
SCHSCCLLCCYCRCKIKKPYKAVQGLWLNLEKDQLFCLLGPNGAGKTTVISCLTGITPVT
HGNALIYGNSVRSSNGISNIRKLIGVCSQFDTLWDALSGQEHLELFATIKGLSPTSKRSE
TKKLLADVKLDDVAKVRAGGYSGGMKRRLSLAIALIGDPKLLFLDEPTTGMDPVTRRHIW
SVIEAAKQGRSIILTTHSMEEANILSDRIGIMAKGRLRCIGTSTLLKSRFGVGFIAKVSF
SKTADNVNSMANTLDSKHHEAVKEFFKQHLDVTPKEEDKSFLTFVIPHEKEKLLENFFAE
LENRELEFGILNIQIGITTLEEVFLNIAKKAELEVAASEETIMPLILPSGTTLQVPLGSK
YVEIPGTISTENPRGLMIEVYWEQDDHGNLCISGHSDEIPVPPNLQISTSTLVIAKPKV

Transcript Sequence

Gene sequence data has not been registered.